Stephen Connollyrsandell As reported above disabling cache (using -Dorg.jenkinsci.plugins.github_branch_source.GitHubSCMSource.cacheSize=0) doesn't help, removing the caching directory does. Perhaps, if caching is disabled, we should cleanup the caches as well in fail safe manner?
I am guessing, might be the case of cache is not getting correctly invalidated resulting in such behavior.
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